Keyword Analysis & Research: clusterprofiler
Keyword Research: People who searched clusterprofiler also searched
Search Results related to clusterprofiler on Search Engine
-
Bioconductor - clusterProfiler
https://bioconductor.org/packages/release/bioc/html/clusterProfiler.html
WEBA universal enrichment tool for interpreting omics data. DOI: 10.18129/B9.bioc.clusterProfiler. Bioconductor version: Release (3.18) This package supports functional characteristics of both coding and non-coding genomics data for thousands of species with up-to-date gene annotation.
DA: 32 PA: 16 MOZ Rank: 9
-
GitHub - YuLab-SMU/clusterProfiler: :bar_chart: A universal …
https://github.com/YuLab-SMU/clusterProfiler
WEBclusterProfiler. clusterProfiler supports exploring functional characteristics of both coding and non-coding genomics data for thousands of species with up-to-date gene annotation. It provides a universal interface for gene functional annotation from a variety of sources and thus can be applied in diverse scenarios.
DA: 55 PA: 65 MOZ Rank: 21
-
R|clusterProfiler-富集分析 - 知乎
https://zhuanlan.zhihu.com/p/35510434
WEBR|clusterProfiler-富集分析. 简单总结clusterProfiler包进行GO、KEGG的富集分析方法,结果输出及内置的图形展示。. 需要将输入的基因格式转为clusterProfiler可分析的格式,通过功能函数bitr实现各种ID之间的转化。. 通过keytypes函数可查看所有支持及可转化类型. SYMBOL ENTREZID ...
DA: 33 PA: 13 MOZ Rank: 51
-
使用R包clusterProfiler进行GO/KEGG富集分析(有参/无参) - 知乎
https://zhuanlan.zhihu.com/p/561522453
WEB使用R包clusterProfiler进行GO/KEGG富集分析(有参/无参). 功能富集分析对于解释转录组学数据至关重要。. 转录组鉴定了差异表达基因后,通常会进行GO或KEGG富集分析,识别这些差异基因的功能或参与调控的通路,来说明关键基因表达上调/或下调后可能会导致哪 ...
DA: 98 PA: 90 MOZ Rank: 90
-
clusterProfiler package - RDocumentation
https://www.rdocumentation.org/packages/clusterProfiler/versions/3.0.4
WEBclusterProfiler. This package implements methods to analyze and visualize functional profiles of genomic coordinates (supported by ChIPseeker), gene and gene clusters. It supports both hypergeometric test and Gene Set Enrichment Analysis for many ontologies/pathways, including: Disease Ontology (via DOSE) Network of Cancer Gene …
DA: 89 PA: 98 MOZ Rank: 63
-
clusterProfiler - Guangchuang Yu
https://guangchuangyu.github.io/software/clusterProfiler/
WEBclusterProfiler: statistical analysis and visualization of functional profiles for genes and gene clusters. The clusterProfiler package implements methods to analyze and visualize functional profiles of genomic coordinates (supported by ChIPseeker), gene and gene clusters. clusterProfiler is released within the Bioconductor project and the ...
DA: 32 PA: 10 MOZ Rank: 47
-
Documentation - clusterProfiler - Guangchuang Yu
https://guangchuangyu.github.io/software/clusterProfiler/documentation/
WEBclusterProfiler: statistical analysis and visualization of functional profiles for genes and gene clusters
DA: 24 PA: 65 MOZ Rank: 79
-
clusterProfiler 4.0: A universal enrichment tool for interpreting …
https://pubmed.ncbi.nlm.nih.gov/34557778/
WEBJul 1, 2021 · We anticipate that clusterProfiler 4.0 will be applied to a wide range of scenarios across diverse organisms. Keywords: biological knowledge mining; clusterProfiler; enrichment analysis; functional analysis; visualization. Functional enrichment analysis is pivotal for interpreting high-throughput omics data in life science.
DA: 84 PA: 57 MOZ Rank: 36
-
Statistical analysis and visualization of functional profiles for …
https://bioconductor.org/packages/release/bioc/vignettes/clusterProfiler/inst/doc/clusterProfiler.html
WEBMar 8, 2024 · Overview. clusterProfiler implements methods to analyze and visualize functional profiles of genomic coordinates (supported by ChIPseeker ), gene and gene clusters.
DA: 84 PA: 55 MOZ Rank: 79
-
clusterProfiler 4.0: A universal enrichment tool for interpreting …
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8454663/
WEBAug 8, 2021 · The clusterProfiler library is one of the popular tools used in functional enrichment analysis (more than 2,500 citations in 2020 according to Google Scholar), and we anticipate that clusterProfiler will continue to be a valuable resource to support the discovery of mechanistic insights and improve our understanding of health and disease.
DA: 63 PA: 70 MOZ Rank: 50