Keyword Analysis & Research: expasy peptide cutter
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PeptideCutter - Expasy
https://web.expasy.org/peptide_cutter/
WEBPeptideCutter [ references / documentation] predicts potential cleavage sites cleaved by proteases or chemicals in a given protein sequence. PeptideCutter returns the query sequence with the possible cleavage sites mapped on …
DA: 68 PA: 27 MOZ Rank: 41
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PeptideCutter - SIB Swiss Institute of Bioinformatics | Expasy
https://www.expasy.org/resources/peptidecutter
WEBSoftware tool. PeptideCutter predicts potential substrate cleavage sites, cleaved by proteases or chemicals in a given protein sequence. The tool returns the query sequence with the possible cleavage sites mapped on it and/or a table of cleavage site positions. Browse the resource website.
DA: 91 PA: 37 MOZ Rank: 2
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PeptideMass - Expasy
https://web.expasy.org/peptide_mass/
WEBPeptideMass cleaves a protein sequence from the UniProt Knowledgebase (Swiss-Prot and TrEMBL) or a user-entered protein sequence with a chosen enzyme, and computes the masses of the generated peptides. The tool also returns theoretical isoelectric point and mass values for the protein of interest.
DA: 57 PA: 66 MOZ Rank: 19
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Expasy PeptideCutter tool: available enzymes
https://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html
WEBExpasy PeptideCutter tool: available enzymes. PeptideCutter. The cleavage specificities of selected enzymes and chemicals: A general model of enzymatic cleavage: Subsite nomenclature was adopted from a scheme created by Schechter and Berger (1967, 1968) and used in the following description of enzyme specificities.
DA: 67 PA: 78 MOZ Rank: 99
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PeptideCutter - Peptide Characterisation Software - Expasy
https://web.expasy.org/peptide_cutter/peptidecutter_instructions.html
WEBPeptideCutter searches a protein sequence from the SWISS-PROT and/or TrEMBL databases or a user-entered protein sequence for protease cleavage sites. Single proteases and chemicals, a selection or the whole list of proteases and chemicals can be used.
DA: 76 PA: 68 MOZ Rank: 52
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peptide_cutter - SIB Swiss Institute of Bioinformatics | Expasy
https://www.expasy.org/search/peptide_cutter
WEBpeptide_cutter in high-quality scientific databases and software tools using Expasy, the Swiss Bioinformatics Resource Portal.
DA: 17 PA: 42 MOZ Rank: 53
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PeptideCutter - Expasy
https://web.expasy.org/peptide_cutter/peptidecutter_special_enzymes.html
WEBThe PeptideCutter program does not take into consideration so-called "chymotrypsin-like" cleavages. These kind of cleavage events at aromatic or hydropohobic residues and are often reported ( Keil , 1986 ). Nevertheless, they were attributed to impurities caused by traces of chymotrypsin and pseudotrypsin, a degradation product of trypsin.
DA: 59 PA: 76 MOZ Rank: 1
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Expasy - PeptideCutter
https://www.expasy.org/cgi-bin/peptidecutter/peptidecutter.pl?enzyme=Tryps;protein=MKWVTFISLLFLFSSAYSRGVFRRDAHKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCNPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALGL;cleave_number=all;cleave_exactly=;cleave_range_min=0;cleave_range_max=608;block_size=60;alphtable=alphtable;seq_table=;cleavage_map=cleavage_map
WEBPeptideCutter The sequence to investigate: 10 20 30 40 50 60 MKWVTFISLL FLFSSAYSRG VFRRDAHKSE VAHRFKDLGE ENFKALVLIA FAQYLQQCPF 70 80 90 100 110 120 EDHVKLVNEV TEFAKTCVAD ESAENCDKSL HTLFGDKLCT VATLRETYGE MADCCAKQEP
DA: 58 PA: 17 MOZ Rank: 36
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FindPept - SIB Swiss Institute of Bioinformatics | Expasy
https://www.expasy.org/resources/findpept
WEBSoftware tool. Identify peptides that result from unspecific cleavage of proteins from their experimental masses, taking into account artefactual chemical modifications, post-translational modifications (PTM) and protease autolytic cleavage. Browse the resource website. Developed by the Swiss-Prot group and supported by the SIB Swiss Institute ...
DA: 63 PA: 24 MOZ Rank: 44
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ExPASy: the proteomics server for in-depth protein knowledge …
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC168970/
WEBJul 1, 2003 · It provides access to a variety of databases and analytical tools dedicated to proteins and proteomics. ExPASy databases include SWISS-PROT and TrEMBL, SWISS-2DPAGE, PROSITE, ENZYME and the SWISS-MODEL repository.
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